nonsignif .pdf



Nom original: nonsignif.pdfTitre: GraphAppPrintJobAuteur: Sofia

Ce document au format PDF 1.7 a été généré par / Microsoft: Print To PDF, et a été envoyé sur fichier-pdf.fr le 24/03/2018 à 14:29, depuis l'adresse IP 5.49.x.x. La présente page de téléchargement du fichier a été vue 183 fois.
Taille du document: 207 Ko (26 pages).
Confidentialité: fichier public


Aperçu du document


R Console
R version 3.4.3 (2017-11-30) -- "Kite-Eating Tree"
Copyright (C) 2017 The R Foundation for Statistical Computing
Platform: i386-w64-mingw32/i386 (32-bit)
R est un logiciel libre livré sans AUCUNE GARANTIE.
Vous pouvez le redistribuer sous certaines conditions.
Tapez 'license()' ou 'licence()' pour plus de détails.
R est un projet collaboratif avec de nombreux contributeurs.
Tapez 'contributors()' pour plus d'information et
'citation()' pour la façon de le citer dans les publications.
Tapez 'demo()' pour des démonstrations, 'help()' pour l'aide
en ligne ou 'help.start()' pour obtenir l'aide au format HTML.
Tapez 'q()' pour quitter R.
> nh4=read.csv2(file.choose(),h=T°
Erreur : unexpected input in "nh4=read.csv2(file.choose(),h=T°"
> nh4=read.csv2(file.choose(),h=T)
> nh4
ChlSOLA Station
1
0.33
SOLA
2
1.29
SOLA
3
1.18
SOLA
4
0.78
SOLA
5
0.45
SOLA
6
1.20
SOLA
7
0.27
PB
8
1.53
PB
9
0.94
PB
10
1.10
PB
11
0.85
PB
12
0.68
PB
13
0.31
PV
14
1.48
PV
15
1.26
PV
16
1.26
PV
17
1.16
PV
18
1.34
PV
> nh4=read.csv2(file.choose(),h=T)
Error in file.choose() : choix de fichier annulé
> nh4=read.csv2(file.choose(),h=T)
> nh4
FluoSOLA ChlSOLA NH4SOLA FluoPB ChlPB NH4PB FluoPV ChlPV NH4PV
1
0.39
0.33
0.00
0.21 0.27 0.21
0.32 0.31 0.44
2
3.00
1.29
0.23
1.85 1.53 0.40
1.67 1.48 0.37
3
0.63
1.18
0.03
0.50 0.94 0.26
0.47 1.26 0.10
4
1.07
0.78
0.25
0.84 1.10 0.19
0.89 1.26 0.24
5
0.22
0.45
0.08
0.33 0.85 0.13
0.37 1.16 0.23
6
0.27
1.20
0.46
0.27 0.68 0.57
0.40 1.34 0.53
> t.test?
+ )
Erreur : ')' inattendu(e) in:
"t.test?
)"
> help(t.test)
starting httpd help server ... done
> wilcox.test(NH4SOLA,NH4PB,paired=TRUE)
Error in wilcox.test(NH4SOLA, NH4PB, paired = TRUE) :
objet 'NH4SOLA' introuvable
> attach(nh4)
> wilcox.test(NH4SOLA,NH4PB,paired=TRUE)
Wilcoxon signed rank test
data: NH4SOLA and NH4PB
V = 2, p-value = 0.09375
alternative hypothesis: true location shift is not equal to 0
> wilcox.test(NH4SOLA,NH4PV,paired=TRUE)
Wilcoxon signed rank test with continuity correction

Page 1

R Console

Page 2

data: NH4SOLA and NH4PV
V = 1, p-value = 0.05848
alternative hypothesis: true location shift is not equal to 0
Warning message:
In wilcox.test.default(NH4SOLA, NH4PV, paired = TRUE) :
impossible de calculer la p-value exacte avec des ex-aequos
> pairwise.perm.t.test()
Error in pairwise.perm.t.test() :
impossible de trouver la fonction "pairwise.perm.t.test"
> library(RVAideMemoire)
*** Package RVAideMemoire v 0.9-69 ***
NOTE: stop using package lsmeans and change to package emmeans, its new version
Warning message:
le package ‘RVAideMemoire’ a été compilé avec la version R 3.4.4
> nh4
FluoSOLA ChlSOLA NH4SOLA FluoPB ChlPB NH4PB FluoPV ChlPV NH4PV
1
0.39
0.33
0.00
0.21 0.27 0.21
0.32 0.31 0.44
2
3.00
1.29
0.23
1.85 1.53 0.40
1.67 1.48 0.37
3
0.63
1.18
0.03
0.50 0.94 0.26
0.47 1.26 0.10
4
1.07
0.78
0.25
0.84 1.10 0.19
0.89 1.26 0.24
5
0.22
0.45
0.08
0.33 0.85 0.13
0.37 1.16 0.23
6
0.27
1.20
0.46
0.27 0.68 0.57
0.40 1.34 0.53
> nh4=read.csv2(file.choose(),h=T)
> nh4
ChlSOLA Station
1
0.33
SOLA
2
1.29
SOLA
3
1.18
SOLA
4
0.78
SOLA
5
0.45
SOLA
6
1.20
SOLA
7
0.27
PB
8
1.53
PB
9
0.94
PB
10
1.10
PB
11
0.85
PB
12
0.68
PB
13
0.31
PV
14
1.48
PV
15
1.26
PV
16
1.26
PV
17
1.16
PV
18
1.34
PV
> nh4=read.csv2(file.choose(),h=T)
> nh4
NH4SOLA Station
1
0.00
SOLA
2
0.23
SOLA
3
0.03
SOLA
4
0.25
SOLA
5
0.08
SOLA
6
0.46
SOLA
7
0.21
PB
8
0.40
PB
9
0.26
PB
10
0.19
PB
11
0.13
PB
12
0.57
PB
13
0.44
PV
14
0.37
PV
15
0.10
PV
16
0.24
PV
17
0.23
PV
18
0.53
PV
> pairwise.perm.t.test(NH4SOLA,Station, p.method = "fdr", paired =TRUE, nperm=999)
Error in pairwise.perm.t.test(NH4SOLA, Station, p.method = "fdr", paired = TRUE, :
objet 'Station' introuvable
> pairwise.perm.t.test(NH4SOLA,Station,data=nh4 p.method = "fdr", paired =TRUE, nperm=999)
Erreur : unexpected symbol in "pairwise.perm.t.test(NH4SOLA,Station,data=nh4 p.method"
> attach(nh4)
The following object is masked from nh4 (pos = 4):

R Console

Page 3

NH4SOLA
> pairwise.perm.t.test(NH4SOLA,Station,data=nh4 p.method = "fdr", paired =TRUE, nperm=999)
Erreur : unexpected symbol in "pairwise.perm.t.test(NH4SOLA,Station,data=nh4 p.method"
> pairwise.perm.t.test(NH4SOLA,Station, p.method = "fdr", paired =TRUE, nperm=999)
|
|
|
0% |
|=
|
1% |
|=
|
2% |
|
==
|
3% |
|===
|
4% |
|====
|
5% |
|====
|
6% |
|=====
|
7% |
|======
|
8% |
|======
|
9% |
|=======
| 10% |
|========
| 11% |
|========
| 12% |
|=========
| 13% |
|==========
| 14% |
|==========
| 15% |
|===========
| 16% |
|============
| 17% |
|=============
| 18% |
|=============
|
19% |
|======
========
| 20% |
|===============
| 21% |
|===============
| 22% |
|================
| 23% |
|=================
| 24% |
|==================
| 25% |
|==================
| 26% |
|==============
=====
| 27% |
|====================
| 28% |
|====================
| 29% |
|====
=================
| 30% |
|======================
| 31% |
|======================
| 32% |
|=======================
| 33% |
|======================
==
| 34% |
|========================
| 35% |
|=========================
| 36%
|
|============
==============
| 37% |
|===========================
| 38% |
|===========================

R Console

Page 4

| 39% |
==========================

|==
| 40% |
|=============================

| 41% |
|=============================

| 42% |
|==============================

| 43% |
|====================

===========

| 44% |
|================================

| 45% |
|================================

| 46%
|==========

|
=======================

| 47% |
|==================================

| 48% |
|==================================

| 49% |
===================================
========

|
| 50% |
|============================

| 51% |
|====================================

| 52% |
|=====================================
====================

| 53% |
|==================

| 54% |
|======================================

| 55% |
|=======================================

6% |
================================
=====

| 5
|========

| 57% |
|====================================

| 58% |
|=========================================

| 59% |
|==========================================
=================

| 60% |
|==========================

| 61% |
|===========================================

| 62% |
|============================================
=============================
==

| 63% |
|================

| 64% |
|============================================

| 65% |
|==============================================

66% |
=========================================
==============

|
|======

| 67% |
|==================================

| 68% |
|================================================

| 69% |
|=================================================
==========================

| 70% |
|========================

| 71% |
|==================================================

| 72% |
|===================================================
======================================
==========

| 74% |
|==========================================

| 75% |
|=====================================================

| 76% |
==================================================
=======================

|====
| 77% |
|================================

| 78% |
|=======================================================

| 79% |
|========================================================
===================================
=======

| 73% |
|==============

|

82%

|

| 80% |
|======================

| 81% |
|==================================================

R Console

Page 5

|==========================================================
| 83%
|
|============
===============================================
| 84% |
|========================================
====================
| 85% |
|============================================================
| 86% |
|==
===========================================================
| 87% |
|==============================
================================
| 88% |
|==========================================================
====
| 89% |
|===============================================================
| 90% |
|====================
============================================
| 91% |
|================================================
================
| 92% |
|=================================================================
| 93%
|
|==========
========================================================
| 94% |
|======================================
============================
| 95% |
|==================================================================
=
| 96% |
|
==================================================================== | 97% |
|============================
========================================= | 98% |
|========================================================
============= | 99% |
|======================================================================| 100%
|
|
|
0% |
|=
|
1% |
|=
|
2% |
|
==
|
3% |
|===
|
4% |
|====
|
5% |
|====
|
6% |
|=====
|
7% |
|======
|
8% |
|======
|
9% |
|=======
| 10% |
|========
| 11% |
|========
| 12% |
|=========
| 13% |
|==========
| 14% |
|==========
| 15% |
|===========
| 16% |
|============
| 17% |
|=============
| 18% |
|=============
|
19% |
|======
========
| 20% |
|===============
| 21% |
|===============
| 22% |
|================
| 23% |
|=================
| 24% |
|==================

R Console

Page 6
| 25% |
|==================

=====

==
| 35% |
|=========================

| 34% |
|========================

| 38% |
|===========================

|====

| 30% |
|======================

| 31% |
|======================

| 32% |
|=======================

|
==============

| 27% |
|====================

| 28% |
|====================

| 29% |
=================

| 26% |
|==============

| 33% |
|======================

| 37% |
|===========================

| 39% |
==========================

| 36%
|============

|==
| 40% |
|=============================

| 41% |
|=============================

| 42% |
|==============================

| 43% |
|====================

===========

| 44% |
|================================

| 45% |
|================================

|
=======================

| 46%
|==========

| 47% |
|==================================

| 48% |
|==================================

| 49% |
===================================
========

|
| 50% |
|============================

| 51% |
|====================================

| 52% |
|=====================================
====================

| 53% |
|==================

| 54% |
|======================================

| 55% |
|=======================================

6% |
================================
=====

| 5
|========

| 57% |
|====================================

| 58% |
|=========================================

| 59% |
|==========================================
=================

| 60% |
|==========================

| 61% |
|===========================================

| 62% |
|============================================
=============================
==

| 64% |
|============================================

| 65% |
|==============================================

66% |
=========================================
==============

| 63% |
|================

|

68%

|

|
|======

| 67% |
|==================================

R Console

Page 7

|================================================
| 69% |
|=================================================
| 70% |
|========================
==========================
| 71% |
|==================================================
| 72% |
|===================================================
| 73% |
|==============
======================================
| 74% |
|==========================================
==========
| 75% |
|=====================================================
| 76% |
|====
==================================================
| 77% |
|================================
=======================
| 78% |
|=======================================================
| 79% |
|========================================================
| 80% |
|======================
===================================
| 81% |
|==================================================
=======
| 82% |
|==========================================================
| 83%
|
|============
===============================================
| 84% |
|========================================
====================
| 85% |
|============================================================
| 86% |
|==
===========================================================
| 87% |
|==============================
================================
| 88% |
|==========================================================
====
| 89% |
|===============================================================
| 90% |
|====================
============================================
| 91% |
|================================================
================
| 92% |
|=================================================================
| 93%
|
|==========
========================================================
| 94% |
|======================================
============================
| 95% |
|==================================================================
=
| 96% |
|
==================================================================== | 97% |
|============================
========================================= | 98% |
|========================================================
============= | 99% |
|======================================================================| 100%
|
|
|
0% |
|=
|
1% |
|=
|
2% |
|
==
|
3% |
|===
|
4% |
|====
|
5% |
|====
|
6% |
|=====
|
7% |
|======
|
8% |
|======
|
9% |
|=======
| 10% |
|========

R Console

Page 8

| 12%
|=========

| 11%
|========

|

| 15%
|===========

|

| 14%
|==========

|

=====

|
==============

| 23% |
|=================

| 35% |
|=========================

| 26% |
|==============

| 30% |
|======================

| 31% |
|======================

==

|
|======

| 27% |
|====================

| 28% |
|====================

| 32% |
|=======================

| 16% |
|============

| 24% |
|==================

| 25% |
|==================

|

| 20% |
|===============

| 21% |
|===============

| 22% |
|================

| 29% |
=================

|

| 17% |
|=============

| 18% |
|=============

19% |
========

| 13%
|==========

| 34% |
|========================

| 38% |
|===========================

| 33% |
|======================

| 37% |
|===========================

| 39% |
==========================

|====

| 36%
|============

|==
| 40% |
|=============================

| 41% |
|=============================

| 42% |
|==============================
===========

| 43% |
|====================

| 44% |
|================================

| 45% |
|================================

| 46%
|==========

|
=======================

| 47% |
|==================================

| 48% |
|==================================

| 49% |
===================================
========

| 51% |
|====================================

| 52% |
|=====================================
====================

|
| 50% |
|============================

|

54%

|

| 53% |
|==================

R Console

Page 9

|======================================
| 55% |
|=======================================
| 5
6% |
|========
================================
| 57% |
|====================================
=====
| 58% |
|=========================================
| 59% |
|==========================================
| 60% |
|==========================
=================
| 61% |
|===========================================
| 62% |
|============================================
| 63% |
|================
=============================
| 64% |
|============================================
==
| 65% |
|==============================================
|
66% |
|======
=========================================
| 67% |
|==================================
==============
| 68% |
|================================================
| 69% |
|=================================================
| 70% |
|========================
==========================
| 71% |
|==================================================
| 72% |
|===================================================
| 73% |
|==============
======================================
| 74% |
|==========================================
==========
| 75% |
|=====================================================
| 76% |
|====
==================================================
| 77% |
|================================
=======================
| 78% |
|=======================================================
| 79% |
|========================================================
| 80% |
|======================
===================================
| 81% |
|==================================================
=======
| 82% |
|==========================================================
| 83%
|
|============
===============================================
| 84% |
|========================================
====================
| 85% |
|============================================================
| 86% |
|==
===========================================================
| 87% |
|==============================
================================
| 88% |
|==========================================================
====
| 89% |
|===============================================================
| 90% |
|====================
============================================
| 91% |
|================================================
================
| 92% |
|=================================================================
| 93%
|
|==========
========================================================
| 94% |
|======================================
============================
| 95% |
|==================================================================
=
| 96% |
|
==================================================================== | 97% |
|============================

R Console

Page 10

========================================= | 98% |
|========================================================
============= | 99% |
|======================================================================| 100%
Pairwise comparisons using permutation paired t tests
data: NH4SOLA and Station
999 permutations
PB
PV
PV
0.62 SOLA 0.13 0.13
P value adjustment method: fdr
> chloro=read.csv2(file.choose(),h=T)
> chloro
ChlSOLA Station
1
0.33
SOLA
2
1.29
SOLA
3
1.18
SOLA
4
0.78
SOLA
5
0.45
SOLA
6
1.20
SOLA
7
0.27
PB
8
1.53
PB
9
0.94
PB
10
1.10
PB
11
0.85
PB
12
0.68
PB
13
0.31
PV
14
1.48
PV
15
1.26
PV
16
1.26
PV
17
1.16
PV
18
1.34
PV
> attach(chloro)
The following object is masked from nh4 (pos = 3):
Station
The following object is masked from nh4 (pos = 5):
ChlSOLA
> pairwise.perm.t.test(ChlSOLA,Station, p.method = "fdr", paired =TRUE, nperm=999)
|
|
|
0% |
|=
|
1% |
|=
|
2% |
|
==
|
3% |
|===
|
4% |
|====
|
5% |
|====
|
6% |
|=====
|
7% |
|======
|
8% |
|======
|
9% |
|=======
| 10% |
|========
| 11% |
|========
| 12% |
|=========
| 13% |
|==========
| 14% |
|==========
| 15% |

R Console

Page 11
|===========
| 17% |
|=============

| 18% |
|=============

19% |
========

=====

==

|
==============

| 35% |
|=========================

| 34% |
|========================

| 38% |
|===========================

|====

| 30% |
|======================

| 31% |
|======================

| 32% |
|=======================

| 26% |
|==============

| 27% |
|====================

| 28% |
|====================

| 29% |
=================

| 23% |
|=================

| 24% |
|==================

| 25% |
|==================

|
|======

| 20% |
|===============

| 21% |
|===============

| 22% |
|================

| 16% |
|============

| 33% |
|======================

| 37% |
|===========================

| 39% |
==========================

| 36%
|============

|==
| 40% |
|=============================

| 41% |
|=============================

| 42% |
|==============================
===========

| 43% |
|====================

| 44% |
|================================

| 45% |
|================================

|
=======================

| 46%
|==========

| 47% |
|==================================

| 48% |
|==================================

| 49% |
===================================
========

|
| 50% |
|============================

| 51% |
|====================================

| 52% |
|=====================================
====================

| 53% |
|==================

| 54% |
|======================================

| 55% |
|=======================================

6% |
================================
=====

| 5
|========

| 57% |
|====================================

| 58% |
|=========================================

R Console

Page 12

| 59% |
|==========================================
=================

| 60% |
|==========================

| 61% |
|===========================================

| 62% |
|============================================
=============================
==

| 63% |
|================

| 64% |
|============================================

| 65% |
|==============================================

66% |
=========================================
==============

|
|======

| 67% |
|==================================

| 68% |
|================================================

| 69% |
|=================================================
==========================

| 70% |
|========================

| 71% |
|==================================================

| 72% |
|===================================================
======================================
==========

| 74% |
|==========================================

| 75% |
|=====================================================

| 76% |
==================================================
=======================

|====
| 77% |
|================================

| 78% |
|=======================================================

| 79% |
|========================================================
===================================
=======

| 80% |
|======================

| 81% |
|==================================================

| 82% |
|==========================================================

|
===============================================
====================

| 85% |
|============================================================

================================

|==
| 87% |
|==============================

| 88% |
|==========================================================

| 89% |
|===============================================================

============================================
================

| 83%
|============

| 84% |
|========================================

| 86% |
===========================================================

====

| 73% |
|==============

| 90% |
|====================

| 91% |
|================================================

| 92% |
|=================================================================
| 93%
|
|==========
========================================================
| 94% |
|======================================
============================
| 95% |
|==================================================================
=
| 96% |
|
==================================================================== | 97% |
|============================
========================================= | 98% |
|========================================================
============= | 99% |
|======================================================================| 100%
|
|
|
0% |
|=
|
1% |

R Console

==

|

Page 13

2%

|====

9%

|=

|

|

5%

|====

|

|
|======

|

| 12%
|=========

8%

| 15%
|===========

4%

|

|

| 14%
|==========

|

| 28% |
|====================

| 32% |
|=======================

|
==============

| 35% |
|=========================

|

|

| 16% |
|============

|
|======

| 23% |
|=================

| 26% |
|==============

| 27% |
|====================

| 30% |
|======================

| 34% |
|========================

| 38% |
|===========================

| 39% |
==========================

|

| 20% |
|===============

| 31% |
|======================

==

6%

|
|=======

| 17% |
|=============

=====

|

|

| 13%
|==========

| 24% |
|==================

| 25% |
|==================

| 29% |
=================

|

|

| 21% |
|===============

| 22% |
|================

7%

3%

|
|=====

| 10%
|========

| 18% |
|=============

19% |
========

|===

|

|
|======

| 11%
|========

|

|

|

|====

| 33% |
|======================

| 37% |
|===========================

| 36%
|============

|==
| 40% |
|=============================

| 41% |
|=============================

| 42% |
|==============================
===========

| 43% |
|====================

| 44% |
|================================

R Console

Page 14
| 45% |
|================================

| 46%
|==========

|
=======================

| 47% |
|==================================

| 48% |
|==================================

| 49% |
===================================
========

|
| 50% |
|============================

| 51% |
|====================================

| 52% |
|=====================================
====================

| 53% |
|==================

| 54% |
|======================================

| 55% |
|=======================================

6% |
================================
=====

| 5
|========

| 57% |
|====================================

| 58% |
|=========================================

| 59% |
|==========================================
=================

| 60% |
|==========================

| 61% |
|===========================================

| 62% |
|============================================
=============================
==

| 63% |
|================

| 64% |
|============================================

| 65% |
|==============================================

66% |
=========================================
==============

|
|======

| 67% |
|==================================

| 68% |
|================================================

| 69% |
|=================================================
==========================

| 70% |
|========================

| 71% |
|==================================================

| 72% |
|===================================================
======================================
==========

| 74% |
|==========================================

| 75% |
|=====================================================

| 76% |
==================================================
=======================

|====
| 77% |
|================================

| 78% |
|=======================================================

| 79% |
|========================================================
===================================
=======

| 73% |
|==============

| 80% |
|======================

| 81% |
|==================================================

| 82% |
|==========================================================

|
===============================================
====================

| 83%
|============

| 84% |
|========================================

| 85% |
|============================================================

| 86% |
===========================================================
================================

|

88%

|

|==
| 87% |
|==============================

R Console

Page 15

|==========================================================
| 89% |
|===============================================================
| 90% |
|====================
============================================
| 91% |
|================================================
================
| 92% |
|=================================================================
| 93%
|
|==========
========================================================
| 94% |
|======================================
============================
| 95% |
|==================================================================
=
| 96% |
|
==================================================================== | 97% |
|============================
========================================= | 98% |
|========================================================
============= | 99% |
|======================================================================| 100%
|
|
|
0% |
|=
|
1% |
|=
|
2% |
|
==
|
3% |
|===
|
4% |
|====
|
5% |
|====
|
6% |
|=====
|
7% |
|======
|
8% |
|======
|
9% |
|=======
| 10% |
|========
| 11% |
|========
| 12% |
|=========
| 13% |
|==========
| 14% |
|==========
| 15% |
|===========
| 16% |
|============
| 17% |
|=============
| 18% |
|=============
|
19% |
|======
========
| 20% |
|===============
| 21% |
|===============
| 22% |
|================
| 23% |
|=================
| 24% |
|==================
| 25% |
|==================
| 26% |
|==============
=====
| 27% |
|====================
| 28% |
|====================
| 29% |
|====
=================
| 30% |
|======================
====

R Console

Page 16
| 31% |
|======================

| 32% |
|=======================
==

|
==============

| 33% |
|======================

| 34% |
|========================

| 35% |
|=========================

| 38% |
|===========================

| 37% |
|===========================

| 39% |
==========================

| 36%
|============

|==
| 40% |
|=============================

| 41% |
|=============================

| 42% |
|==============================

| 43% |
|====================

===========

| 44% |
|================================

| 45% |
|================================

|
=======================

| 46%
|==========

| 47% |
|==================================

| 48% |
|==================================

| 49% |
===================================
========

|
| 50% |
|============================

| 51% |
|====================================

| 52% |
|=====================================
====================

| 53% |
|==================

| 54% |
|======================================

| 55% |
|=======================================

6% |
================================
=====

| 5
|========

| 57% |
|====================================

| 58% |
|=========================================

| 59% |
|==========================================
=================

| 60% |
|==========================

| 61% |
|===========================================

| 62% |
|============================================
=============================
==

| 63% |
|================

| 64% |
|============================================

| 65% |
|==============================================

66% |
=========================================
==============

|
|======

| 67% |
|==================================

| 68% |
|================================================

| 69% |
|=================================================
==========================

| 70% |
|========================

| 71% |
|==================================================

| 72% |
|===================================================
======================================

|

74%

|

| 73% |
|==============

R Console

Page 17

|==========================================
| 75% |
|=====================================================
| 76% |
|====
==================================================
| 77% |
|================================
=======================
| 78% |
|=======================================================
| 79% |
|========================================================
| 80% |
|======================
===================================
| 81% |
|==================================================
=======
| 82% |
|==========================================================
| 83%
|
|============
===============================================
| 84% |
|========================================
====================
| 85% |
|============================================================
| 86% |
|==
===========================================================
| 87% |
|==============================
================================
| 88% |
|==========================================================
====
| 89% |
|===============================================================
| 90% |
|====================
============================================
| 91% |
|================================================
================
| 92% |
|=================================================================
| 93%
|
|==========
========================================================
| 94% |
|======================================
============================
| 95% |
|==================================================================
=
| 96% |
|
==================================================================== | 97% |
|============================
========================================= | 98% |
|========================================================
============= | 99% |
|======================================================================| 100%
==========

Pairwise comparisons using permutation paired t tests
data: ChlSOLA and Station
999 permutations
PB
PV
PV
0.14 SOLA 0.96 0.14
P value adjustment method: fdr
> Fluo=read.csv2(file.choose(),h=T)
> Fluo
NH4SOLA Station
1
0.00
SOLA
2
0.23
SOLA
3
0.03
SOLA
4
0.25
SOLA
5
0.08
SOLA
6
0.46
SOLA
7
0.21
PB
8
0.40
PB
9
0.26
PB
10
0.19
PB
11
0.13
PB
12
0.57
PB
13
0.44
PV
14
0.37
PV
15
0.10
PV
16
0.24
PV

R Console
17
0.23
PV
18
0.53
PV
> Fluo=read.csv2(file.choose(),h=T)
Error in file.choose() : choix de fichier annulé
> Fluo=read.csv2(file.choose(),h=T)
> Fluo
Fluo Station
1 0.39
SOLA
2 3.00
SOLA
3 0.63
SOLA
4 1.07
SOLA
5 0.22
SOLA
6 0.27
SOLA
7 0.21
PB
8 1.85
PB
9 0.50
PB
10 0.84
PB
11 0.33
PB
12 0.27
PB
13 0.32
PV
14 1.67
PV
15 0.47
PV
16 0.89
PV
17 0.37
PV
18 0.40
PV
> attach(Fluo)
The following object is masked _by_ .GlobalEnv:
Fluo
The following object is masked from chloro:
Station
The following object is masked from nh4 (pos = 4):
Station
> pairwise.perm.t.test(Fluo,Station, p.method = "fdr", paired =TRUE, nperm=999)
Error in pairwise.perm.t.test(Fluo, Station, p.method = "fdr", paired = TRUE, :
'Fluo' and 'Station' lengths differ
> fluo=Fluo
> fluo
Fluo Station
1 0.39
SOLA
2 3.00
SOLA
3 0.63
SOLA
4 1.07
SOLA
5 0.22
SOLA
6 0.27
SOLA
7 0.21
PB
8 1.85
PB
9 0.50
PB
10 0.84
PB
11 0.33
PB
12 0.27
PB
13 0.32
PV
14 1.67
PV
15 0.47
PV
16 0.89
PV
17 0.37
PV
18 0.40
PV
> pairwise.perm.t.test(Fluo,Station, p.method = "fdr", paired =TRUE, nperm=999)
Error in pairwise.perm.t.test(Fluo, Station, p.method = "fdr", paired = TRUE, :
'Fluo' and 'Station' lengths differ
> rm(Fluo)
> fluo
Fluo Station
1 0.39
SOLA
2 3.00
SOLA
3 0.63
SOLA
4 1.07
SOLA
5 0.22
SOLA
6 0.27
SOLA

Page 18

R Console

Page 19

7 0.21
PB
8 1.85
PB
9 0.50
PB
10 0.84
PB
11 0.33
PB
12 0.27
PB
13 0.32
PV
14 1.67
PV
15 0.47
PV
16 0.89
PV
17 0.37
PV
18 0.40
PV
> attach(fluo)
The following objects are masked from Fluo:
Fluo, Station
The following object is masked from chloro:
Station
The following object is masked from nh4 (pos = 5):
Station
> pairwise.perm.t.test(Fluo,Station, p.method = "fdr", paired =TRUE, nperm=999)
|
|
|
0% |
|=
|
1% |
|=
|
2% |
|
==
|
3% |
|===
|
4% |
|====
|
5% |
|====
|
6% |
|=====
|
7% |
|======
|
8% |
|======
|
9% |
|=======
| 10% |
|========
| 11% |
|========
| 12% |
|=========
| 13% |
|==========
| 14% |
|==========
| 15% |
|===========
| 16% |
|============
| 17% |
|=============
| 18% |
|=============
|
19% |
|======
========
| 20% |
|===============
| 21% |
|===============
| 22% |
|================
| 23% |
|=================
| 24% |
|==================
| 25% |
|==================
| 26% |
|==============
=====
| 27% |

R Console

Page 20

| 29% |
=================

==
| 35% |
|=========================

| 33% |
|======================

| 34% |
|========================

| 38% |
|===========================

|====

| 30% |
|======================

| 31% |
|======================

| 32% |
|=======================

|
==============

|====================

| 28% |
|====================

| 37% |
|===========================

| 39% |
==========================

| 36%
|============

|==
| 40% |
|=============================

| 41% |
|=============================

| 42% |
|==============================

| 43% |
|====================

===========

| 44% |
|================================

| 45% |
|================================

|
=======================

| 46%
|==========

| 47% |
|==================================

| 48% |
|==================================

| 49% |
===================================
========

|
| 50% |
|============================

| 51% |
|====================================

| 52% |
|=====================================
====================

| 53% |
|==================

| 54% |
|======================================

| 55% |
|=======================================

6% |
================================
=====

| 5
|========

| 57% |
|====================================

| 58% |
|=========================================

| 59% |
|==========================================
=================

| 60% |
|==========================

| 61% |
|===========================================

| 62% |
|============================================
=============================
==

| 63% |
|================

| 64% |
|============================================

| 65% |
|==============================================

66% |
=========================================
==============

|
|======

| 67% |
|==================================

| 68% |
|================================================

| 69% |
|=================================================

| 70% |
|========================

R Console

Page 21

==========================

| 71% |
|==================================================

| 72% |
|===================================================
======================================
==========

| 74% |
|==========================================

| 75% |
|=====================================================

| 76% |
==================================================
=======================

|====
| 77% |
|================================

| 78% |
|=======================================================

| 79% |
|========================================================
===================================
=======

| 80% |
|======================

| 81% |
|==================================================

| 82% |
|==========================================================

|
===============================================
====================

| 85% |
|============================================================

================================

|==
| 87% |
|==============================

| 88% |
|==========================================================

| 89% |
|===============================================================

============================================
================

| 83%
|============

| 84% |
|========================================

| 86% |
===========================================================

====

| 73% |
|==============

| 90% |
|====================

| 91% |
|================================================

| 92% |
|=================================================================
| 93%
|
|==========
========================================================
| 94% |
|======================================
============================
| 95% |
|==================================================================
=
| 96% |
|
==================================================================== | 97% |
|============================
========================================= | 98% |
|========================================================
============= | 99% |
|======================================================================| 100%
|
|
|
0% |
|=
|
1% |
|=
|
2% |
|
==
|
3% |
|===
|
4% |
|====
|
5% |
|====
|
6% |
|=====
|
7% |
|======
|
8% |
|======
|
9% |
|=======
| 10% |
|========
| 11% |
|========
| 12% |
|=========
| 13% |

R Console

Page 22

| 15%
|===========

| 14%
|==========

|

=====

| 32% |
|=======================

| 31% |
|======================

==

|
==============

| 35% |
|=========================

| 26% |
|==============

| 27% |
|====================

| 28% |
|====================

| 29% |
=================

| 23% |
|=================

| 24% |
|==================

| 25% |
|==================

|
|======

| 20% |
|===============

| 21% |
|===============

| 22% |
|================

| 16% |
|============

| 17% |
|=============

| 18% |
|=============

19% |
========

|==========

|

| 34% |
|========================

| 38% |
|===========================

|====

| 30% |
|======================

| 33% |
|======================

| 37% |
|===========================

| 39% |
==========================

| 36%
|============

|==
| 40% |
|=============================

| 41% |
|=============================

| 42% |
|==============================
===========

| 43% |
|====================

| 44% |
|================================

| 45% |
|================================

|
=======================

| 47% |
|==================================

| 48% |
|==================================

| 49% |
===================================
========

====================

|

|
| 50% |
|============================

| 51% |
|====================================

| 52% |
|=====================================

6%

| 46%
|==========

| 53% |
|==================

| 54% |
|======================================

| 55% |
|=======================================

| 5
|========

R Console

Page 23

================================
=====

| 57% |
|====================================

| 58% |
|=========================================

| 59% |
|==========================================
=================

| 60% |
|==========================

| 61% |
|===========================================

| 62% |
|============================================
=============================
==

| 63% |
|================

| 64% |
|============================================

| 65% |
|==============================================

66% |
=========================================
==============

|
|======

| 67% |
|==================================

| 68% |
|================================================

| 69% |
|=================================================
==========================

| 70% |
|========================

| 71% |
|==================================================

| 72% |
|===================================================
======================================
==========

| 74% |
|==========================================

| 75% |
|=====================================================

| 76% |
==================================================
=======================

|====
| 77% |
|================================

| 78% |
|=======================================================

| 79% |
|========================================================
===================================
=======

| 80% |
|======================

| 81% |
|==================================================

| 82% |
|==========================================================

|
===============================================
====================

| 85% |
|============================================================

================================

|==
| 87% |
|==============================

| 88% |
|==========================================================

| 89% |
|===============================================================

============================================
================

| 83%
|============

| 84% |
|========================================

| 86% |
===========================================================

====

| 73% |
|==============

| 90% |
|====================

| 91% |
|================================================

| 92% |
|=================================================================
| 93%
|
|==========
========================================================
| 94% |
|======================================
============================
| 95% |
|==================================================================
=
| 96% |
|
==================================================================== | 97% |
|============================
========================================= | 98% |
|========================================================
============= | 99% |
|======================================================================| 100%

R Console

Page 24

|

==

|

2%

9%

|=

|

|====

|

5%

|

1%

8%

| 15%
|===========

|

|

| 28% |
|====================

| 32% |
|=======================

| 35% |
|=========================

|

42%

|

6%

|

|
|=======

| 13%
|==========

|

| 16% |
|============

|
|======

| 23% |
|=================

| 27% |
|====================

| 26% |
|==============

| 30% |
|======================

| 34% |
|========================

| 38% |
|===========================

| 39% |
==========================

|

|

| 20% |
|===============

| 31% |
|======================

==

3%

|

| 17% |
|=============

=====

| 29% |
=================

|

| 24% |
|==================

| 25% |
|==================

|

|
|=====

|

| 21% |
|===============

| 22% |
|================

|
==============

|===

7%

|

|

| 10%
|========

| 14%
|==========

|

0%

|

|

| 18% |
|=============

19% |
========

4%

|
|======

| 11%
|========

|

|=

|

|====

|

|
|======

| 12%
|=========

|

|

|====

| 33% |
|======================

| 37% |
|===========================

| 36%
|============

|==
| 40% |
|=============================

| 41% |
|=============================

R Console

Page 25

|==============================

| 43% |
|====================

===========

| 44% |
|================================

| 45% |
|================================

| 46%
|==========

|
=======================

| 47% |
|==================================

| 48% |
|==================================

| 49% |
===================================
========

|
| 50% |
|============================

| 51% |
|====================================

| 52% |
|=====================================
====================

| 53% |
|==================

| 54% |
|======================================

| 55% |
|=======================================

6% |
================================
=====

| 5
|========

| 57% |
|====================================

| 58% |
|=========================================

| 59% |
|==========================================
=================

| 60% |
|==========================

| 61% |
|===========================================

| 62% |
|============================================
=============================
==

| 63% |
|================

| 64% |
|============================================

| 65% |
|==============================================

66% |
=========================================
==============

|
|======

| 67% |
|==================================

| 68% |
|================================================

| 69% |
|=================================================
==========================

| 70% |
|========================

| 71% |
|==================================================

| 72% |
|===================================================
======================================
==========

| 74% |
|==========================================

| 75% |
|=====================================================

| 76% |
==================================================
=======================

|====
| 77% |
|================================

| 78% |
|=======================================================

| 79% |
|========================================================
===================================
=======

| 73% |
|==============

| 80% |
|======================

| 81% |
|==================================================

| 82% |
|==========================================================

|
===============================================
====================

| 83%
|============

| 84% |
|========================================

| 85% |
|============================================================

R Console

Page 26

| 86% |
===========================================================
================================
====

|==
| 87% |
|==============================

| 88% |
|==========================================================

| 89% |
|===============================================================

============================================
================

| 90% |
|====================

| 91% |
|================================================

| 92% |
|=================================================================
| 93%
|
|==========
========================================================
| 94% |
|======================================
============================
| 95% |
|==================================================================
=
| 96% |
|
==================================================================== | 97% |
|============================
========================================= | 98% |
|========================================================
============= | 99% |
|======================================================================| 100%
Pairwise comparisons using permutation paired t tests
data: Fluo and Station
999 permutations
PB
PV
PV
0.71 SOLA 0.38 0.57
P value adjustment method: fdr
> save.image("C:\\Users\\Sofia\\Desktop\\Monitoring\\nonsgnif")
>


Aperçu du document nonsignif.pdf - page 1/26
 
nonsignif.pdf - page 3/26
nonsignif.pdf - page 4/26
nonsignif.pdf - page 5/26
nonsignif.pdf - page 6/26
 




Télécharger le fichier (PDF)


nonsignif.pdf (PDF, 207 Ko)

Télécharger
Formats alternatifs: ZIP



Documents similaires


nonsignif
gornall overview
journal pbio 1001684
caillaud et al 2008 sex selection morpho renc
telemetry on the digestive system
les macaques savent compter